Brain Mesh

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Inheritance graph

Defined in file : brainvisa/toolboxes/morphologist/types/anatomy.py

Used in the following processes

Ana Get Opened Whole Brain Surface
Anatomist Show 3D Activations

Associated formats

BrainVISA mesh formats
GIFTI file
gz compressed GIFTI file
gz compressed MESH mesh
gz compressed MNI OBJ mesh
gz compressed PLY mesh
gz compressed TRI mesh
MESH mesh
MNI OBJ mesh
PLY mesh
TRI mesh
Z compressed GIFTI file
Z compressed MESH mesh
Z compressed MNI OBJ mesh
Z compressed PLY mesh
Z compressed TRI mesh

Associated ontology rules

  • brainvisa-3.0 :
    • {protocol}/{subject}/tri/<subject>_brain
    {protocol}/{subject}/mesh/<subject>_brain
    {protocol}/{subject}/mesh/{acquisition}/<subject>_brain
  • brainvisa-3.1.0 :
    • {protocol}/{subject}/t1mri/{acquisition}/{analysis}/segmentation/mesh/<subject>_brain
  • brainvisa-3.2.0 :
    • {center}/{subject}/t1mri/{acquisition}/{analysis}/segmentation/mesh/<subject>_brain
    {center}/{subject}/anatomical_mri/{acquisition}/{analysis}/mesh/brain_<subject>
  • flat :
    • ./<filename>_brain
  • morphologist-bids-1.0 :
    • sub-{subject}/ses-{session}/anat/t1mri/{acquisition}/{analysis}/segmentation/mesh/<subject>_brain

    Key attributes

  • brainvisa-3.0 :
    • protocol ,  subject ,  acquisition
  • brainvisa-3.1.0 :
    • protocol ,  subject ,  acquisition ,  analysis
  • brainvisa-3.2.0 :
    • time_duration ,  acquisition_date ,  time_point ,  rescan ,  contrast ,  mapped ,  center ,  subject ,  acquisition ,  analysis ,  modality ,  side
  • morphologist-bids-1.0 :
    • time_duration ,  acquisition_date ,  time_point ,  rescan ,  subject ,  session ,  acquisition ,  analysis